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| This is a list of well documented training datasets covering different data types and different aspects of research data management for use in research data management training. |
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Natur conservation
- DiverReef: A global database of the behavior of recreational divers and their interactions with reefs over 20 years: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.4519
- Giglio, V. J., Adelir‐Alves, J., Balzaretti Merino, N., Bravo‐Olivas, M. L., Camp, E. F., Casoli, E., Chávez‐Dagostino, R. M., Ferretti, E., Fraser, D., Grillo, A. C., Jiménez‐Guiérrez, S., Leite, K. L., Lucrezi, S., Luiz, O. J., Luna‐Pérez, B., McBride, J., Milanese, M., Moity, N., Pinheiro, J. V., … Ferreira, C. E. L. (2025). DiverReef: A global database of the behavior of recreational divers and their interactions with reefs over 20 years. Ecology, 106(2), e4519. https://doi.org/10.1002/ecy.4519
Talk id talk-2158
- Giglio, V. J., Adelir‐Alves, J., Balzaretti Merino, N., Bravo‐Olivas, M. L., Camp, E. F., Casoli, E., Chávez‐Dagostino, R. M., Ferretti, E., Fraser, D., Grillo, A. C., Jiménez‐Guiérrez, S., Leite, K. L., Lucrezi, S., Luiz, O. J., Luna‐Pérez, B., McBride, J., Milanese, M., Moity, N., Pinheiro, J. V., … Ferreira, C. E. L. (2025). DiverReef: A global database of the behavior of recreational divers and their interactions with reefs over 20 years. Ecology, 106(2), e4519. https://doi.org/10.1002/ecy.4519
- Global Roadkill Data: a dataset on terrestrial vertebrate mortality caused by collision with vehicles: https://www.nature.com/articles/s41597-024-04207-x
- Grilo, C., Neves, T., Bates, J., Le Roux, A., Medrano-Vizcaíno, P., Quaranta, M., Silva, I., Soanes, K., Wang, Y., Data Collection Consortium, Abate, S. D., D’ Abra, F., Cedeño, S. A., De Alencar, P. R., De Almeida, M. F. P., Alves, M. H., Alves, P., De Assis, A. A., Ament, R., … Guinard, E. (2025). Global Roadkill Data: A dataset on terrestrial vertebrate mortality caused by collision with vehicles. Scientific Data, 12(1), 505. https://doi.org/10.1038/s41597-024-04207-x
- SNAPSHOT USA 2019–2023: The First Five Years of Data From a Coordinated Camera Trap Survey of the United States: https://onlinelibrary.wiley.com/doi/10.1111/geb.13941
- Rooney, B., Kays, R., Cove, M. V., Jensen, A., Goldstein, B. R., Pate, C., Castiblanco, P., Abell, M. E., Adley, J., Agenbroad, B., Ahlers, A. A., Alexander, P. D., Allen, D., Allen, M. L., Alston, J. M., Alyetama, M., Anderson, T. L., Andrade, R., Anhalt‐Depies, C., … McShea, W. J. (2025). SNAPSHOT USA 2019–2023: The First Five Years of Data From a Coordinated Camera Trap Survey of the United States. Global Ecology and Biogeography, 34(1), e13941. https://doi.org/10.1111/geb.13941
- CamTrapAsia: A dataset of tropical forest vertebrate communities from 239 camera trapping studies: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.4299
- Mendes, C. P., Albert, W. R., Amir, Z., Ancrenaz, M., Ash, E., Azhar, B., Bernard, H., Brodie, J., Bruce, T., Carr, E., Clements, G. R., Davies, G., Deere, N. J., Dinata, Y., Donnelly, C. A., Duangchantrasiri, S., Fredriksson, G., Goossens, B., Granados, A., … Luskin, M. S. (2024). CamTrapAsia: A dataset of tropical forest vertebrate communities from 239 camera trapping studies. Ecology, 105(6), e4299. https://doi.org/10.1002/ecy.4299
- The Breeding Bird Survey of the United Kingdom: https://onlinelibrary.wiley.com/doi/10.1111/geb.13943
- Massimino, D., Baillie, S. R., Balmer, D. E., Bashford, R. I., Gregory, R. D., Harris, S. J., Heywood, J. J. N., Kelly, L. A., Noble, D. G., Pearce‐Higgins, J. W., Raven, M. J., Risely, K., Woodcock, P., Wotton, S. R., & Gillings, S. (2025). The Breeding Bird Survey of the United Kingdom. Global Ecology and Biogeography, 34(1), e13943. https://doi.org/10.1111/geb.13943
- Integrated evidence-based extent of occurrence for North American bison (Bison bison) since 1500 CE and before: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.3864
- Martin, J. M., Short, R. A., Plumb, G. E., Markewicz, L., Van Vuren, D. H., Wehus‐Tow, B., Otárola‐Castillo, E., & Hill, M. E. (2023). Integrated evidence‐based extent of occurrence for North American bison (Bison bison) since 1500 1500 CE and before. Ecology, 104(1), e3864. https://doi.org/10.1002/ecy.3864
Biology
- Palmer Penguins (trait data): https://allisonhorst.github.io/palmerpenguins/articles/intro.html
- Horst, A. M., Hill, A. P., & Gorman, K. B. (2020). allisonhorst/palmerpenguins: V0.1.0 (Version v0.1.0) [Computer software]. Zenodo.1.0 (Version v0.1.0) [Computer software]. Zenodo. https://doi.org/10.5281/ZENODO.3960218
Data originally published in:
- Gorman KB, Williams TD, Fraser WR (2014). Ecological sexual dimorphism and environmental variability within a community of Antarctic penguins (genus Pygoscelis). PLoS ONE 9(3):e90081. https://doi.org/10.1371/journal.pone.0090081
Individual datasets: Individual data can be accessed directly via the Environmental Data Initiative:
Palmer Station Antarctica LTER and K. Gorman, 2020. Structural size measurements and isotopic signatures of foraging among adult male and female Adélie penguins (Pygoscelis adeliae) nesting along the Palmer Archipelago near Palmer Station, 2007-2009 ver 5. Environmental Data Initiative. https://doi.org/10.6073/pasta/98b16d7d563f265cb52372c8ca99e60f
Palmer Station Antarctica LTER and K. Gorman, 2020. Structural size measurements and isotopic signatures of foraging among adult male and female Gentoo penguin (Pygoscelis papua) nesting along the Palmer Archipelago near Palmer Station, 2007-2009 ver 5. Environmental Data Initiative. https://doi.org/10.6073/pasta/7fca67fb28d56ee2ffa3d9370ebda689
Palmer Station Antarctica LTER and K. Gorman, 2020. Structural size measurements and isotopic signatures of foraging among adult male and female Chinstrap penguin (Pygoscelis antarcticus) nesting along the Palmer Archipelago near Palmer Station, 2007-2009 ver 6. Environmental Data Initiative. https://doi.org/10.
- Hawks: contained in the
Stat2DataR package (https://cran.r-project.org/web/packages/Stat2Data/index.html)- Ann Cannon, George Cobb, Bradley Hartlaub, Julie Legler, Robin Lock, Thomas Moore, Allan Rossman, Jeffrey Witmer. (2013). Stat2Data: Datasets for Stat2 (p. 2.0.0) [Dataset]. https://doi.org/10.32614/CRAN.package.Stat2Data
- Count data of harbour seal counts in the Elbe Estuary: https://doi.pangaea.de/10.1594/PANGAEA.907670
- Bundesanstalt Für Gewässerkunde. (2019). Harbour seal counts in the Elbe Estuary, Germany, between Wedel and Cuxhaven in 2018/2019 (p. 451 data points) [Text/tab-separated-values]. PANGAEA. https://doi.org/10.1594/PANGAEA.907670
- Small mammals from the Caatinga: A dataset for the Brazilian semiarid biome: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.3879
- Da Costa‐Pinto, A. L., Bovendorp, R. S., Bocchiglieri, A., Caccavo, A., Delciellos, A. C., Malhado, A. C., De Almeida, A. K. R., Braga, C., Loretto, D., Câmara, E. M. V. C., Menezes, F. H., Guilhon, G., Paise, G., Sobral, G., Varjão, I. C. G., Ferreira, J. V. A., Da Silva Oliveira, L., Geise, L., Pereira, L. C. M., … Ladle, R. J. (2023). Small mammals from the Caatinga: A dataset for the Brazilian semiarid biome. Ecology, 104(1), e3879. https://doi.org/10.1002/ecy.3879
- A bird species occurrence dataset from passive audio recordings across dense urban areas in Gothenburg, Sweden: https://www.nature.com/articles/s41597-025-05481-z
- Long-term observation of the egg and chick size in the nests of Larus ichthyaetus in Lake Chany, Russia: https://www.nature.com/articles/s41597-022-01454-8
- Yurlov, A. K., Yurlova, N. I., Garyushkina, M. Yu., Selivanova, M. A., & Doi, H. (2022). Long-term observation of the egg and chick size in the nests of Larus ichthyaetus in Lake Chany, Russia. Scientific Data, 9(1), 372. https://doi.org/10.1038/s41597-022-01454-8
Forestry
- DFG research training group RTG2300: Enrichment of European beech forests with conifers
- Relative location and diameter of a full tree inventory on 8 studyplots: https://doi.pangaea.de/10.1594/PANGAEA.932023
- Glatthorn, J., & Parth, A. (2021). RTG 2300—Tree census data—Winter 2017/2018 (p. 112643 data points) [Text/tab-separated-values]. PANGAEA. https://doi.org/10.1594/PANGAEA.932023
- The study plots, where the trees were recorded:
- Ammer, C., Annighöfer, P., Balkenhol, N., Hertel, D., Leuschner, C., Polle, A., Lamersdorf, N., Scheu, S., & Glatthorn, J. (2020). RTG 2300—Study design, location, topography and climatic conditions of research plots in 2020 (p. 470 data points) [Text/tab-separated-values]. PANGAEA. https://doi.org/10.1594/PANGAEA.923125
- Abundance and taxonomic data of forest arthropods, collected on the plots from above: https://doi.pangaea.de/10.1594/PANGAEA.923125 (sollte https://doi.org/10.1594/PANGAEA.949484 sein)
- Relative location and diameter of a full tree inventory on 8 studyplots: https://doi.pangaea.de/10.1594/PANGAEA.932023
- Tree inventory data from permanent plots in French forest reserves: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.4324
- Cateau, E., Debaive, N., Drapier, N., Chantreau, F., Gilg, O., Laroche, F., Morin, X., Demets, V., Pimenta, R., Thompson, L., & Paillet, Y. (2024). Tree inventory data from permanent plots in F rench forest reserves. Ecology, 105(7), e4324. https://doi.org/10.1002/ecy.4324
Genetics
- Environmental DNA analysis of cephalopods off the Azores: https://doi.pangaea.de/10.1594/PANGAEA.926840
- Visser, F., Merten, V., Bayer, T., Oudejans, M. G., de Jonge, D., Puebla, O., Reusch, T. B. H., Fuss, J., & Hoving, H.-J. T. (2021). Environmental DNA analysis of cephalopods off the Azores (p. 10 data points) [Text/tab-separated-values]. PANGAEA. https://doi.org/10.1594/PANGAEA.926840
Taxnomy, Traits
- OpenRefine Training Dataset based on a subset of the BGBM Herbarium: https://zenodo.org/records/14918375. Some ideas howto work with the data: https://zenodo.org/records/14732682.
- Botanic Garden and Botanical Museum Berlin. (2025). OpenRefine Training Dataset based on a subset of the BGBM Herbarium (Version 1.0) [Dataset]. Botanic Garden and Botanical Museum, Berlin. https://doi.org/10.5281/ZENODO.14918375
- Fichtmueller, D. (2025). OpenRefine—Hands On. https://doi.org/10.5281/ZENODO.14732682
- Ecological traits for 1374 arthropod species collected in a German grassland: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.70077
- Jena Experiment
- Bröcher, M., Meyer, S. T., Leher, A. G., & Ebeling, A. (2025). Ecological traits for 1374 arthropod species collected in a German grassland. Ecology, 106(4), e70077. https://doi.org/10.1002/ecy.70077
- Images of 175 individual animals of five distinct taxonomic groups: camels, penguins, goats, tortoises and toads: https://doi.pangaea.de/10.1594/PANGAEA.967637
- Fruhner, M., Tapken, H., & Stroetmann, E. (2024). Images of 175 individual animals of five distinct taxonomic groups: Camels, penguins, goats, tortoises and toads (ZooMix ID) (p. 3356 data points) [Text/tab-separated-values]. PANGAEA. https://doi.org/10.1594/PANGAEA.967637
Animal Tracking
- HomeRange: A global database of mammalian home ranges: https://onlinelibrary.wiley.com/doi/full/10.1111/geb.13625
- Broekman, M. J. E., Hoeks, S., Freriks, R., Langendoen, M. M., Runge, K. M., Savenco, E., Ter Harmsel, R., Huijbregts, M. A. J., & Tucker, M. A. (2023). HomeRange: A global database of mammalian home ranges. Global Ecology and Biogeography, 32(2), 198–205. https://doi.org/10.1111/geb.13625
- The body size and temperature dependence of organismal locomotion: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.3114
- Cloyed, C. S., & Dell, A. I. (2020). The body size and temperature dependence of organismal locomotion. Ecology, 101(10), e03114. https://doi.org/10.1002/ecy.3114
Time Series
- Nutrient and stoichiometric time series measurements of decomposing coarse detritus in freshwaters: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.4114
- Robbins, C. J., Norman, B. C., Halvorson, H. M., Manning, D. W. P., Bastias, E., Biasi, C., Dodd, A. K., Eckert, R. A., Gossiaux, A., Jabiol, J., Mehring, A. S., & Pastor, A. (2023). Nutrient and stoichiometric time series measurements of decomposing coarse detritus in freshwaters. Ecology, 104(8), e4114. https://doi.org/10.1002/ecy.4114
- Annual biomass spatial data for southern California (2001–2021): Above- and belowground, standing dead, and litter: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.4031
- Schrader‐Patton, C. C., Underwood, E. C., & Sorenson, Q. M. (2023). Annual biomass spatial data for southern California (2001–2021): Above‐ and belowground, standing dead, and litter. Ecology, 104(5), e4031. https://doi.org/10.1002/ecy.4031
- Long-term monitoring of Mount St. Helens micrometeorology: https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecy.3950
- Che‐Castaldo, C., & Crisafulli, C. M. (2023). Long‐term monitoring of Mount St. Helens micrometeorology. Ecology, 104(3), e3950. https://doi.org/10.1002/ecy.3950
Spatial Data
- https://data.fdz.ioer.de/dataset.xhtml?persistentId=doi:10.71830/6ILS40 with a tutorial https://training.fdz.ioer.info/intro.html#.
- Dworczyk, C., Dunkel, A., Rafiei, F., & Syrbe, R.-U. (2025). Replication Package for: Exploring Spatial and Biodiversity Data with Python and JupyterLab: Release version v1.8.0 (Version 1.0, pp. 123835203, 17495) [Application/zip,text/markdown]. ioerDATA. https://doi.org/10.71830/6ILS40
Environmental Datasets
Land cover
- EGLC: Ensemble Global Land Cover Reference Dataset (2000-2022): https://zenodo.org/records/15594682
Other Collections
- A collection of vegetation and zoological data sets: https://www.davidzeleny.net/anadat-r/doku.php/en:data
- The Humanitarian Data Exchange: https://data.humdata.org/
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